The Best Radiology Anatomy Atlases for CT and MRI in 2026

By the RadioAnatomy Team••6 min read
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To learn anatomy on CT and MRI you need labelled scans you can scroll through, not static pictures. The best options in 2026 are the free RadioAnatomy radiology atlas, IMAIOS e-Anatomy for the most complete paid reference, and Radiopaedia for cases once you know the normal anatomy.

Abdominal CT in the RadioAnatomy radiology atlas: 3D models of the organs beside the CT volume, with liver, kidneys, spleen, pancreas, stomach and adrenal glands labelled
An abdominal CT in the free radiology atlas: the organs as 3D models and labelled on the CT volume; the slices open below in axial, coronal and sagittal planes. Image sources and licences.

What makes a good cross-sectional atlas

  • Scrollable stacks, because structures are recognised by following them from slice to slice.
  • Labels you can hide, so you can test yourself.
  • More than one plane and modality: axial, coronal and sagittal, CT and MRI.
  • A link to 3D anatomy, to turn a grey shape back into an organ.
  • Access you can afford for the whole course.

The best radiology anatomy atlases

  1. 1. RadioAnatomy

    Best for: learning CT and MRI anatomy for free, with a 3D view

    The radiology atlas shows annotated CT and MRI studies slice by slice and in 3D, so you can follow a structure through the stack and then see its shape. It sits next to an anatomy atlas and a histology atlas, and the mobile app adds an AI agent for anatomy questions.

  2. 2. IMAIOS e-Anatomy

    Best for: the most comprehensive labelled reference

    Thousands of labelled structures across CT, MRI and radiographs, in many languages. A few modules are free; full access is a subscription, which many radiology departments hold.

  3. 3. Radiopaedia

    Best for: cases and reference articles

    A free, collaborative radiology encyclopedia with scrollable cases. Use it once you know the normal anatomy, to see how disease changes it.

  4. 4. Radiology Assistant

    Best for: illustrated teaching articles

    Free articles from the Radiological Society of the Netherlands that explain how to read each type of study, with clear diagrams.

  5. 5. Complete Anatomy

    Best for: relating a cross-section to a 3D model

    It lets you cut a 3D model in any plane, which helps when the orientation of a scan is confusing. Subscription.

Thorax in the RadioAnatomy 3D anatomy atlas: ribs, sternum, muscles, arteries and veins, with the list of body systems on the left
The thorax in the free 3D anatomy atlas: every system can be shown, hidden or searched. Image sources and licences.

Comparison at a glance

AtlasBest forCost
RadioAnatomyAnnotated CT and MRI with 3DFree on the web
IMAIOS e-AnatomyComplete labelled referenceSubscription, some free modules
RadiopaediaCases and articlesFree
Radiology AssistantHow to read a studyFree
Complete Anatomy3D model with cross-sectionsSubscription

How to learn cross-sectional anatomy

  • One region at a time. Start with the chest or the abdomen and stay there for a week.
  • Follow, do not memorise. Pick one structure, such as the aorta or the oesophagus, and scroll it from top to bottom.
  • Use landmarks. Learn a few levels well (carina, coeliac trunk, renal hilum, femoral heads) and place everything else around them.
  • Switch planes. Find the same structure in axial, coronal and sagittal views.
  • Hide the labels and name what you see before checking.
  • Five minutes a day beats two hours on Sunday.

For a wider plan, read how to learn radiology in medical school and master radiology in 5 minutes per day.

Frequently asked questions

What is the best free radiology anatomy atlas?

The RadioAnatomy radiology atlas is free in the browser and shows annotated CT and MRI with a 3D view. Radiopaedia is also free and is the best source of cases.

Is IMAIOS e-Anatomy free?

Some modules are free. Full access needs a subscription; check whether your university or hospital already provides it.

Should I learn CT or MRI anatomy first?

Start with CT. It is the more common study, its anatomy is easier to recognise, and what you learn carries over to MRI.

RadioAnatomy is our own product, so weigh what we say about it accordingly. We have no affiliate or commercial relationship with the other tools listed.

Get the RadioAnatomy app

Anatomy, radiology and histology in one app, on the App Store and Google Play.